BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017H10LP1|AL427226
(497 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1782 746 0.0
>3x_Contig1782
Length = 24703
Score = 746 bits (373), Expect = 0.0
Identities = 449/474 (94%), Gaps = 4/474 (0%)
Strand = Plus / Minus
Query: 1 gatcaattctgcagttctaatccatctacgacgtctggtatacttagagaatgaatcctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5206 gatcaattctgcagttctaatccatctacgacgtctggtatacttagagaatgaatcctc 5147
Query: 61 tgtcgatggttttttccatgtgttatcgtagtaaatgaagccatcatccgcaccaggcga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5146 tgtcgatggttttttccatgtgttatcgtagtaaatgaagccatcatccgcaccaggcga 5087
Query: 121 agagatnagatatttggcctcgtactagagagttggatggctccatcattggtcatgtta 180
|| | || | |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 5086 agc-agtag-tctttggcctcgtactagagagttggatggctccatcattggtcatgtca 5029
Query: 181 agtctccatgtyttatccacccatctccatgccataccgactagcctcttctggaagttt 240
||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 5028 agtctccatgtcttatccacccatctccatgccataccg-ctagcctcttctggaagttt 4970
Query: 241 aaattgttctggagatggtgcctcgtttaawaactcatctgttcatgaacttctctcgta 300
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 4969 aaattgttctggagatggtgcctcgtttaaaaactcatctgtccatgaacttctctcgta 4910
Query: 301 agttaacatgttggcagttcagccaataccgagccaacgtctctggttctmatataatac 360
||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 4909 agtcaacatgttggcagtccagccaataccgagccaacgtctctggttctcatataatac 4850
Query: 361 ataagtgaatttaatgggtttcccatcatmtgcatcggattccaatcgagctcgatgaaa 420
|||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 4849 ataagtgaatctaatgggtttcccatcatctgcatcgg-ttccaatcgagctcgatgaaa 4791
Query: 421 gattmttgaatttmttatgccctgaagcgagaattccaccttgatgcttrttaa 474
|||| |||| ||| |||||| ||| ||||| ||||||||||||||||| ||||
Sbjct: 4790 gattcttgactttcttatgcactgcagcgaagattccaccttgatgcttgttaa 4737
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2132
Number of Sequences: 1807
Number of extensions: 2132
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 497
length of database: 10,358,551
effective HSP length: 15
effective length of query: 482
effective length of database: 10,331,446
effective search space: 4979756972
effective search space used: 4979756972
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)